Open Access
Copyright: The authors. This article is an open access
article licensed under the terms of the Creative Commons Attribution License
(http://creativecommons.org/licenses/by/2.0) which permits unrestricted use,
distribution and reproduction in any medium, provided the work is properly
cited.
R esearch
(Published online:
16-03-2015)
13.
Biological and molecular characterization of
classical swine fever challenge virus from India -
Parveen Kumar, Vikramaditya Upmanyu and Pronab Dhar
Veterinary World, 8(3): 330-335
doi:
10.14202/vetworld.2015.330-335
Parveen
Kumar:
Division of Biological Standardization, Indian Veterinary Research
Institute, Izatnagar, Uttar Pradesh, India;
vetsparveen@gmail.com
Vikramaditya Upmanyu:
Division of Biological Standardization, Indian Veterinary Research
Institute, Izatnagar, Uttar Pradesh, India;
vupmanyu17@rediffmail.com
Pronab
Dhar: Division of Biological Standardization, Indian
Veterinary Research Institute, Izatnagar, Uttar Pradesh, India;
drpdhar@gmail.com
Received:
14-12-2014, Revised: 24-01-2015, Accepted: 29-01-2015, Published
online: 16-03-2015
Corresponding author:
Parveen Kumar, e-mail: vetsparveen@gmail.com
Citation:
Kumar P, Upmanyu V,
Dhar P (2015) Biological and molecular characterization of
classical swine fever challenge virus from India, Veterinary
World 8(3):330-335.
Abstract
Aim:
The aim of this study was biological and molecular
characterization of classical swine fever (CSF) challenge virus
from India.
Materials and Methods: CSF challenge virus maintained at
Division of Biological standardization was experimentally infected
to two seronegative piglets. The biological characterization was
done by clinical sign and symptoms along with postmortem findings.
For molecular characterization 5’-nontranslated region, E2 and
NS5B regions were amplified by reverse transcription polymerase
chain reaction and sequenced. The sequences were compared with
that of reference strains and the local field isolates to
establish a phylogenetic relation.
Results: The virus produced symptoms of acute disease in the
piglets with typical post-mortem lesions. Phylogenetic analysis of
the three regions showed that the current Indian CSF Challenge
virus is having maximum similarity with the BresciaX strain (USA)
and Madhya Pradesh isolate (India) and is belonging to subgroup
1.2 under Group 1.
Conclusion: Based on biological and
molecular characterization of CSF challenge virus from India is
described as a highly virulent virus belonging to subgroup 1.2
under Group 1 along with some field isolates from India and
Brescia strain.
Keywords: Classical Swine fever, Challenge
virus, molecular characterization, biological characterization,
phylogeny
References
1. Barman, N.N., Bora, D.P., Khatoon, E., Mandal, S., Rakshit,
A., Rajbongshi, G., Depner, K., Chakraborty, A. and Kumar, S.
(2014) Classical swine fever in wild hog: Report of its
prevalence in Northeast India. Transbound. Emerg. Dis., doi:
10.1111/tbed.12298.
http://dx.doi.org/10.1111/tbed.12298 |
|
2. Moennig, V., Floegel-Niessmann, G. and Greiser-Wilke, I.,
(2003) Clinical signs and epidemiology of classical swine
fever: A review of new knowledge. Vet. J., 165(1): 11-20.
http://dx.doi.org/10.1016/S1090-0233(02)00112-0 |
|
3. OIE. (2014) Classical Swine Fever. OIE Terrestrial Manual
2014. Chapter 2.8.3.
http://www.oie.int/fileadmin/Home/eng/Health_standards/tahc/2010/chapitre_csf.pdf.
accessed on 19-12-14. |
|
4. Chander, V., Nandi, S., Ravishankar, C., Upmanyu, V. and
Verma, R. (2014) Classical swine fever in pigs: Recent
developments and future perspectives. Anim. Health. Res. Rev.,
15(1): 87-101.
http://dx.doi.org/10.1017/S1466252314000024
PMid:25605279 |
|
5. Donahuea, B.C., Petrowskia, H.M., Melkonianb, K., Warda,
G.B., Mayra, G.A. and Metwallya, S. (2012) Analysis of
clinical samples for early detection of classical swine fever
during infection with low, moderate, and highly virulent
strains in relation to the onset of clinical signs. J. Virol.
Methods., 179: 108-115.
http://dx.doi.org/10.1016/j.jviromet.2011.10.008
PMid:22036595 |
|
6. Meyers, G. and Thiel, H.J. (1996) Molecular
characterization of pestiviruses. Adv. Virus Res., 47: 53-118.
http://dx.doi.org/10.1016/S0065-3527(08)60734-4 |
|
7. Ruggli, N., Tratschin, J.D., Mittelholzer, C. and Hofmann,
M.A. (1996) Nucleotide sequence of classical swine fever virus
strain Alfort/187 and transcription of infectious RNA from
stably cloned full-length cDNA. J. Virol., 70(6): 3478-3487.
PMid:8648680 PMCid:PMC190221 |
|
8. Paton, D.J., McGoldrick, A., Greiser-Wilke, I.,
Parchariyanon, S., Song, J.Y., Liou, P.P., Stadejek, T.,
Lowings, J.P., Bjorklund, H. and Belak, S. (2000) Genetic
typing of classical swine fever virus. Vet. Microbiol.,
73(2-3): 137-157.
http://dx.doi.org/10.1016/S0378-1135(00)00141-3 |
|
9. Lowings, J.P., Ibata, G., Needham, J. and Paton, D.J.
(1996) Classical swine fever diversity and evaluation. J. Gen.
Virol., 77: 1311-1371.
http://dx.doi.org/10.1099/0022-1317-77-6-1311
PMid:8683221 |
|
10. Bjorklund, H., Lowings, P., Stadejek, T., Vilcek, S.,
Greiser-Wilke, I., Paton, D. and Belak, S. (1999) Phylogenetic
comparison and molecular epidemiology of classical swine fever
virus. Virus Gene., 19: 189-195.
http://dx.doi.org/10.1023/A:1008132613228
PMid:10595410 |
|
11. Sarma, D.K., Mishra, N, Vilcek, S., Rajukumar, K., Behera,
S.P., Nema, R.K., Dubey, P. and Dubey, S.C. (2009)
Phylogenetic analysis of recent classical swine fever virus
(CSFV) isolates from Assam, India. Comp. Immunol. Microbiol.
Infect. Dis., 34(1): 11-15.
http://dx.doi.org/10.1016/j.cimid.2009.09.005
PMid:19896713 |
|
12. Hofmann, B., Beer, M., Schelp, C., Schirrmeier, H. and
Depner, K. (2005) Validation for a real-time RT-PCR assay for
sensitive and specific detection of classical swine fever. J.
Virol. Methods, 130: 36-44.
http://dx.doi.org/10.1016/j.jviromet.2005.05.030
PMid:16055202 |
|
13. Katz, J.B., Ridpath, J.F. and Bolin, S.R. (1993)
Presumptive diagnostic differentiation of hog cholera virus
from bovine viral diarrhea and border disease viruses by using
a cDNA nested-amplification approach. J. Clin. Mmicrobiol.,
13(3): 565-568. |
|
14. Patil, S.S., Hemadri, D., Shankar, B.P., Raghavendra, A.G,
Veeresh, H, Sindhoora, B, Chandan, S, Gagendragad, M.R.,
Sreekala, K. and Prabhudas, K. (2010) Genetic typing of recent
classical swine fever isolates from India. Vet. Microbiol.,
141(3-4): 367-373.
http://dx.doi.org/10.1016/j.vetmic.2009.09.021
PMid:19836905 |
|
15. Poster, A., Schmeiser, S., Perera, C.L., Rodreguez,
L.J.P., Faris-Lepoureau, M.T. and Becher, P. (2014) Classical
swine fever isolates from Cuba form a new subgenotype 1.4.
Vet. Microbiol., 161(3-4): 334-338.
http://dx.doi.org/10.1016/j.vetmic.2012.07.045
PMid:22902191 |
|
16. Tamura, K, Stecher, G, Peterson, D, Filipski, A. and
Kumar, S. (2013) MEGA6: Molecular evolutionary genetics
analysis version 6.0. Mol. Biol. Evol., 30(12): 2725-2729.
http://dx.doi.org/10.1093/molbev/mst197
PMid:24132122 PMCid:PMC3840312 |
|
17. Greiser-Wilke, I. Zimmermannb, B., Fritzemeiera, J,
Floegelc G. and Moennig, V. (2000) Structure and presentation
of a World Wide Web database of CSF virus isolates held at the
EU reference laboratory. Vet. Microbiol., 73(2-3): 131-136.
http://dx.doi.org/10.1016/S0378-1135(00)00140-1 |
|
18. Desai, G.S., Sharma, A., Kataria, R.S., Barman, N.N. and
Tiwari, A.K. (2010) 5'-UTR-based phylogenetic analysis of
classical swine fever virus isolates from India. Acta Virol.,
54(1): 79-82.
http://dx.doi.org/10.4149/av_2010_01_79
PMid:20201618 |
|